Checking date: 18/02/2025 10:21:07


Course: 2025/2026

Microscopy
(19801)
Bachelor in Neuroscience (Plan: 517 - Estudio: 389)


Coordinating teacher:

Department assigned to the subject:

Type: Electives
ECTS Credits: 6.0 ECTS

Course:
Semester:




Learning Outcomes
K17: Is familiar with microscopy techniques, artificial intelligence and computational models applied to neuroscience. S2: Carries out their work or vocation in a professional manner, and possess appropriate competencies as demonstrated through the development and defence of arguments, and problem-solving within their field of study. S5: Appropriately uses the scientific and technical vocabulary of the different subfields within Neuroscience. S7: Comprehends the computational and experimental tools used for analysis and quantification of neuroscience data, and can appropriately apply these tools to significant problems in neuroscience. C3: Apply knowledge about technologies for the study of the Nervous System and the brain (Medical Imaging, brain-machine interfaces) to develop new systems for diagnosis and treatment, as well as and other applications within Neuroscience (Artificial Intelligence, Robotics) with the aims of improving the quality of life and furthering social progress. C5: Apply your neuroscience knowledge in a unifying and integrated fashion as part of a multidisciplinary team (pharmaceutical sector, health industry, diagnostic techniques, health information technologies, government agencies and regulatory bodies. C7: Apply the scientific and technical principles you acquired during your undergraduate training, together with your own natural learning capabilities, to better adapt to novel opportunities arising from scientific and technological development.
Description of contents: programme
1. Fundamentals of microscopy and principles of optics. Electromagnetic spectrum, wavelength. Reflection and refraction. Resolution. Lenses and aberrations. 2. Principles of optical microscopy. The optical microscope: Mechanical and optical components. Magnification vs. resolution. Focal length and working distance. Types of illumination. Brightfield microscopy. Darkfield microscopy. Phase contrast. Polarised light Interferential contrast. 3. Sample preparation for optical microscopy. Fixation and preservation of the sample. Types of staining. Sample embedding and mounting. 4. Fluorescence microscopy/confocal microscopy. Fluorescence properties. Fluorescence microscopes. Characteristics of fluorochromes. Characteristics of conventional and spectral confocal microscopy. Applications of confocal microscopy. 5. Image acquisition. Capture parameters. 6. 3D confocal microscopy and analysis. Image resolution. Image processing. 3D reconstruction. Types of projections. 7. In vivo confocal microscopy. Incubation systems. Environmental conditions. Autofluorescence. Phototoxicity. Uptake conditions. Live cell labelling. Applications. 8. Sample preparation for fluorescence. Types of fixation. Marking protocols Mounting of samples. 9. Fundamentals of electron microscopy. Electromagnetic lenses. Vacuum systems. Types of filaments. 10. Scanning electron microscopy (SEM). Column and lens types. Imaging detectors. X-ray Scattering Spectroscopy (EDS). Environmental microscopes. Examples and applications. 11. Transmission electron microscopy (TEM). Column and electromagnetic lenses. Aberrations. Detection systems. CCD cameras. Analytical detectors. 12. Sample preparation for SEM and TEM. Metallisation: Sputtering and evaporation. Critical point drying. Staining methods.
Learning activities and methodology
Classroom lectures. Face-to-face classes: reduced (workshops, seminars, case studies). Student individual work. Laboratory session. Final exam. Seminars and lectures supported by computer and audiovisual aids. Practical learning based on cases and problems, and exercise resolution. Individual and group or cooperative work with the option of oral or written presentation. Individual and group tutorials to resolve doubts and queries about the subject. Internships and directed laboratory activities.
Assessment System
  • % end-of-term-examination/test 60
  • % of continuous assessment (assigments, laboratory, practicals...) 40




Extraordinary call: regulations

The course syllabus may change due academic events or other reasons.